Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364439: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278146' containing sample 'Staphylococcus aureus M0542'
1 ILLUMINA (Illumina HiSeq 2000) run: 2.6M spots, 529.7M bases, 263.3Mb downloads

UUID: bc371cfe-baef-4a50-b7d2-ecd3a6be289e

Design: Illumina sequencing of Staphylococcus aureus M0542 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA216528 • SRP031286 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0542

SAMN02325481 • SRS490857 • All experiments • All runs

Organism: Staphylococcus aureus M0542

Library:

Name: Pond-278146

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 388272.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4S44P

material_type: DNA:DNA Somatic

product_order: PDO-1800

product_part_number: P-WG-0004

project: G44816

research_project: RP-433

root_sample_id: SM-4CVGC

sample_id: SM-4S44P

work_request: 37549

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 10:02:10.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 1 run, 2.6M spots, 529.7M bases, 263.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR1011994	2,622,381	529.7M	263.3Mb	2013-10-16

ID:: 521257

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